We're talking about the reusable baby bottles, and the hard plastic resuable bottles usually marked with a 7 on the bottom. Although not all of these bottles have the chemical in them, some might. It's the fact that the chemical can cause a mutation, or cancer though, It's not killing babies outright. The plastic one time use bottles are not really efficient, nor should be used more than once, due to the chemicals in the bottle. As far as i know, they don't release estrogen into the water; that's caused by synthetic hormones in birth control pills, being disposed of naturally.. The bottles are just expensive to make, and not very environmentally friendly.
As far as resistance goes, sure, some will build up, but that's not really the point, is it? The fact is the chemical can cause some mutations, and effects to producing gametes later in life (Results see post #1), and can result in an early onset of puberty. So some resistance wouldn't really change the damage that has already been done. It's not like resistance to meningitus, or mumps, for example, where live, weakened organisms are used to provoke a primary response of the immune system. (The second allows for a quicker response, thereby not allowing the organism to take over; memory b cells which is why we can't get chicken pox twice)